Unit 6: Gene Expression and Regulation

AP Biology: 94 practice questions with detailed explanations.

Unit Study Guide

Executive Summary

Unit 6 follows information flow: DNA → RNA → protein, and the controls that decide which genes a cell expresses. Regulation creates cell specialization.

DNA and RNA

DNA: double-stranded, deoxyribose, A–T/G–C, stores information. RNA: single-stranded, ribose, A–U/G–C, transmits and processes it. Both polymerize 5′ → 3′.

Replication

Semiconservative: each daughter double helix keeps one original strand. Helicase unwinds; primase lays RNA primers; DNA polymerase III extends new strands; leading strand is continuous, lagging strand builds Okazaki fragments joined by ligase. Proofreading keeps errors rare.

Transcription and processing

RNA polymerase reads the template strand 3′ → 5′ and builds mRNA 5′ → 3′ at the promoter. In eukaryotes, pre-mRNA gets a 5′ cap, poly-A tail, and splicing — introns removed, exons joined (alternative splicing multiplies protein variety).

Translation

Ribosomes read codons (three bases); tRNA anticodons carry matching amino acids. Initiation at AUG; elongation moves through the ribosome's A, P, E sites; stop codons end the chain. The genetic code is universal and redundant (multiple codons per amino acid).

Regulation

Prokaryotes use operons: the lac operon is inducible (repressor off when allolactose binds), the trp operon repressible (corepressor tryptophan activates the repressor). Eukaryotes layer transcription factors, enhancers, chromatin modification, and RNA processing. Cell specialization = differential gene expression.

Mutations and biotechnology

Point mutations: silent (no change), missense (one amino acid), nonsense (early stop). Frameshifts (insertion/deletion) scramble everything downstream. Biotechnology: PCR amplifies DNA; gel electrophoresis separates fragments by size; bacterial transformation and recombinant DNA produce proteins.

Top 5 Concepts to Master

  1. 1Contrast DNA vs RNA structure and base pairing.
  2. 2Describe replication enzymes and leading/lagging strands.
  3. 3Follow mRNA from promoter through capping, splicing, and translation.
  4. 4Explain lac (inducible) vs trp (repressible) operon regulation.
  5. 5Predict mutation consequences: silent, missense, nonsense, frameshift.

Key Terms & Definitions

Practice with Flashcards
Semiconservative replication

Each new double helix keeps one original strand.

Helicase

Unwinds the DNA double helix.

DNA polymerase

Extends new DNA strands and proofreads.

Okazaki fragments

Short lagging-strand pieces joined by ligase.

Promoter

DNA sequence where RNA polymerase binds.

Intron

Noncoding segment removed during RNA splicing.

Exon

Coding segment retained in mature mRNA.

Codon

Three-base mRNA unit specifying an amino acid.

Anticodon

tRNA triplet complementary to a codon.

Operon

Prokaryotic gene cluster under one promoter/operator.

Transcription factor

Protein controlling gene transcription.

Missense mutation

Base change that swaps one amino acid.

Frameshift mutation

Insertion/deletion shifting the reading frame.

PCR

Polymerase chain reaction amplifying a DNA segment.

Common Misconceptions: Exam Traps

Both new DNA strands grow continuously.

Correct: The lagging strand is built backward in Okazaki fragments.

RNA polymerase reads the coding strand.

Correct: It reads the template strand, producing RNA complementary to it.

Every mutation changes the protein.

Correct: Silent mutations leave the amino acid unchanged thanks to codon redundancy.

The lac operon is on by default and turned off by lactose.

Correct: It is off by default; allolactose binds the repressor to turn it on.

All cells in an organism express the same genes.

Correct: Cell specialization comes from differential gene expression — same genome, different transcriptomes.

Question Bank Breakdown

By difficulty

easy 44medium 38hard 12

By topic

Regulation of Gene Expression 22Biotechnology 20Transcription and RNA Processing 20Translation 19DNA and RNA Structure 12Mutations 10Replication 8Gene Expression and Cell Specialization 8

All Questions in this Unit